Coloring the Mu Transpososome.
Darcy, I. K., Bhutra, A., Chang, J., Druivenga, N., McKinney, C., Medikonduri, R. K., Mills, S., Navarra Madsen, J., Ponnusamy, A., Sweet, J., Thompson, T.,

2005

Solving oriented tangle equations involving 4-plats.
Isabel K. Darcy
J. Knot Theory Ramifications 14 (2005) 1007-1027.

Solving unoriented tangle equations involving 4-plats.
Isabel K. Darcy
J. Knot Theory Ramifications 14 (2005) 993-1005.

Tangle analysis of Xer recombination reveals only three solutions; all consistent with a single three dimensional topology pathway.
Mariel Vazquez, Sean D Colloms and De Witt Sumners
J. Mol. Biol. 346 (2005) 493-504.

Tangle solutions for a family of DNA-rearranging proteins.
Dorothy Buck and Cynthia Verjovsky Marcotte,
Math. Proc. Cambridge Philos. Soc. 139 (2005) 59-80.

2001

Biological distances on DNA knots and links: applications to XER recombination.
Isabel K Darcy,
Knots in Hellas '98, Vol. 2 (Delphi). J. Knot Theory Ramifications 10 (2001) 269-294.

2000

Dehn surgeries on knots which yield lens spaces and genera of knots.
Hiroshi Goda and Masakazu Teragaito
Math. Proc. Cambridge Philos. Soc. 129 (2000) 501--515